{"id":4604,"date":"2019-01-24T19:58:54","date_gmt":"2019-01-24T19:58:54","guid":{"rendered":"http:\/\/www.cytognomix.com\/?p=4604"},"modified":"2019-01-24T19:58:54","modified_gmt":"2019-01-24T19:58:54","slug":"january-24-2019-updated-version-of-cytognomix-visual-analytics-cytova-on-mutationforecaster","status":"publish","type":"post","link":"https:\/\/www.cytognomix.com\/?p=4604","title":{"rendered":"January 24, 2019. Updated version of CytoGnomix Visual Analytics (CytoVA) on MutationForecaster"},"content":{"rendered":"<p>We have just updated the <a href=\"https:\/\/mutationforecaster.com\/learn.php#cytova\">CytoVA<\/a> software product. It now contains all PubMed references through Dec 2018 and the most recent version of the human phenotype ontology (HPO). With CytoVA (see below), you can query Shannon pipeline, Veridical or VEP output, the list of predicted deleterious variants, with this software \u00a0for HPO clinical phenotypes. \u00a0The software \u00a0reports the articles, and PubMed index codes that support the relationship between the\u00a0gene variants and the queried phenotype. It&#8217;s a very effective way of filtering exome or complete genome sequencing results to limit the best candidate variants.<\/p>\n<p><img loading=\"lazy\" class=\"alignleft size-full wp-image-4605\" src=\"http:\/\/www.cytognomix.com\/wp-content\/uploads\/2019\/01\/CytoVA_filterShannon.png\" alt=\"\" width=\"1129\" height=\"834\" srcset=\"https:\/\/www.cytognomix.com\/wp-content\/uploads\/2019\/01\/CytoVA_filterShannon.png 1129w, https:\/\/www.cytognomix.com\/wp-content\/uploads\/2019\/01\/CytoVA_filterShannon-300x222.png 300w, https:\/\/www.cytognomix.com\/wp-content\/uploads\/2019\/01\/CytoVA_filterShannon-768x567.png 768w, https:\/\/www.cytognomix.com\/wp-content\/uploads\/2019\/01\/CytoVA_filterShannon-1024x756.png 1024w\" sizes=\"(max-width: 1129px) 100vw, 1129px\" \/><\/p>\n","protected":false},"excerpt":{"rendered":"<p>We have just updated the CytoVA software product. It now contains all PubMed references through Dec 2018 and the most recent version of the human phenotype ontology (HPO). With CytoVA (see below), you can query Shannon pipeline, Veridical or VEP output, the list of predicted deleterious variants, with this software \u00a0for HPO clinical phenotypes. \u00a0The [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":[],"categories":[6],"tags":[],"_links":{"self":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/posts\/4604"}],"collection":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=4604"}],"version-history":[{"count":1,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/posts\/4604\/revisions"}],"predecessor-version":[{"id":4606,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/posts\/4604\/revisions\/4606"}],"wp:attachment":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=4604"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=4604"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=4604"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}