{"id":1979,"date":"2011-05-18T15:05:42","date_gmt":"2011-05-18T15:05:42","guid":{"rendered":"\/?page_id=1979"},"modified":"2021-03-13T16:31:34","modified_gmt":"2021-03-13T16:31:34","slug":"subtelomeric-sc-fish-probes-catalogcontinued","status":"publish","type":"page","link":"https:\/\/www.cytognomix.com\/?page_id=1979","title":{"rendered":"Subtelomeric SC-FISH probes Catalog(Continued)"},"content":{"rendered":"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
<\/em> <\/p>\n

<\/em><\/p>\n

<\/em> <\/em><\/td>\n

<\/td>\nChr. Target<\/em> <\/em> <\/em> <\/em> <\/p>\n

<\/em><\/td>\n

 <\/em> <\/em>scFISH<\/em> probes<\/em>1<\/sup><\/em> <\/p>\n

<\/em><\/td>\n

 <\/em>Competitor <\/em>Recombinant <\/em>probes<\/em>2<\/sup><\/em> <\/em> <\/em> <\/em><\/td>\n <\/em> <\/em><\/td>\n<\/tr>\n
Catalog<\/strong> Number<\/strong><\/td>\nChr
\n<\/strong><\/td>\n		Length(<\/strong>bp<\/strong>)
\n<\/strong><\/td>\n		Distance from Telomere (kb)<\/strong>3<\/sup><\/strong> <\/p>\n

<\/strong><\/td>\n

Estimated clone size
\n<\/strong><\/td>\n		Approx distance of STS from telomere (kb)4<\/strong><\/td>\n<\/tr>\n
ST-0000131<\/span><\/a><\/td>\n8ptel<\/td>\n2271<\/td>\n455.377 \u2013 457.645<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2154<\/td>\n71.870<\/td>\n– 74.023<\/td>\n100 kb6<\/td>\n194 \u00b1 100<\/td>\n<\/tr>\n
ST-0000132<\/a><\/td>\n8qtel<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000133<\/a><\/td>\n8qtel<\/td>\n2949<\/td>\n145.868 \u2013 148.816<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000134<\/a><\/td>\n9ptel<\/td>\n1754<\/td>\n243.057 \u2013 244.809<\/td>\n115 kb<\/td>\n140 \u00b1 1159<\/td>\n<\/tr>\n
ST-0000135<\/a><\/td>\n9qtel<\/td>\n2232<\/td>\n248.993 \u2013 251.226<\/td>\n95 kb<\/td>\n223 \u00b1 95<\/td>\n<\/tr>\n
ST-0000136<\/a><\/td>\n9qtel<\/td>\n2707<\/td>\n231.636 \u2013 234.340<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000137<\/a><\/td>\n9qtel<\/td>\n2278<\/td>\n257.634 \u2013 259.785<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000138<\/a><\/td>\n10ptel<\/td>\n2132^+<\/td>\n363.852 \u2013 365.942<\/td>\n80 kb6<\/td>\n328 \u00b1 80<\/td>\n<\/tr>\n
ST-0000139<\/a><\/td>\n10ptel<\/td>\n2051+<\/td>\n320.896 \u2013 322.898<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000140<\/a><\/td>\n10ptel<\/td>\n3203+<\/td>\n282.669 \u2013 285.872<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000141<\/a><\/td>\n10ptel<\/td>\n2526^+<\/td>\n151.566 \u2013 154.092<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n1820<\/td>\n<\/td>\n75 kb<\/td>\n193 \u00b1 75<\/td>\n<\/tr>\n
ST-0000142<\/a><\/td>\n10qtel<\/td>\n<\/td>\n184.961 \u2013 186.780<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000143<\/a><\/td>\n11ptel<\/td>\n2884<\/td>\n1,205.118<\/td>\n– 1,208.002<\/td>\n110 kb6<\/td>\n290 \u00b1 110<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2489*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000144<\/a><\/td>\n11ptel<\/td>\n<\/td>\n66.589 \u2013 69.078<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2462<\/td>\n1,781.588<\/td>\n– 1,784.049<\/td>\n160 kb<\/td>\nunknown<\/td>\n<\/tr>\n
ST-0000145<\/a><\/td>\n11qtel<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000146<\/a><\/td>\n11qtel<\/td>\n2026*<\/td>\n33.471 \u2013 31.445<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n1914<\/td>\n<\/td>\n100 kb<\/td>\n0-209<\/td>\n<\/tr>\n
ST-0000147<\/span><\/a><\/td>\n12ptel<\/td>\n<\/td>\n180.472 \u2013 182.385<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n3456<\/td>\n<\/td>\n165 kb<\/td>\n180 \u00b1 165<\/td>\n<\/tr>\n
ST-0000148<\/a><\/td>\n12qtel<\/td>\n<\/td>\n154.406 \u2013 157.861<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000149<\/a><\/td>\n13qtel<\/td>\n3209<\/td>\n366.172 \u2013 369.380<\/td>\n75 kb<\/td>\n2,900 \u00b1 75<\/td>\n<\/tr>\n
ST-0000150<\/a><\/td>\n14qtel<\/td>\n1866<\/td>\n3,155.170<\/td>\n– 3,157.035<\/td>\n160 kb<\/td>\n(4,100-4,200) \u00b1 117<\/td>\n<\/tr>\n
ST-0000151<\/a><\/td>\n14qtel<\/td>\n3839<\/td>\n3,128.031<\/td>\n– 3,131.869<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000152<\/a><\/td>\n14qtel<\/td>\n1984*<\/td>\n1,022.102 – 1,020.118<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000153<\/a><\/td>\n14qtel<\/td>\n2617*<\/td>\n1,019.175 – 1,016.558<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000154<\/a><\/td>\n15qtel<\/td>\n1607<\/td>\n131.552 \u2013 133.158<\/td>\n100kb<\/td>\n420 \u00b1 100<\/td>\n<\/tr>\n
ST-0000155<\/a><\/td>\n16ptel<\/td>\n3361*<\/td>\n73.825 \u2013 77.186<\/td>\n110 kb<\/td>\n3056\u00b1 110<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2082*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000156<\/a><\/td>\n16ptel<\/td>\n<\/td>\n56.610 \u2013 58.692<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2567<\/td>\n<\/td>\n110 kb6<\/td>\n210 \u00b1 110<\/td>\n<\/tr>\n
ST-0000157<\/a><\/td>\n16qtel<\/td>\n<\/td>\n183.506 \u2013 186.072<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000158<\/a><\/td>\n17ptel<\/td>\n2593<\/td>\n895.021 \u2013 897.613<\/td>\n70 kb6<\/td>\n105 \u00b1 70<\/td>\n<\/tr>\n
ST-0000159<\/a><\/td>\n17ptel<\/td>\n4984<\/td>\n859.347 \u2013 864.330<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2219*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000160<\/a><\/td>\n17ptel<\/td>\n<\/td>\n101.957 \u2013 104.176<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n6191*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000161<\/a><\/td>\n17qtel<\/td>\n<\/td>\n106.452 \u2013 100.262<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n3026<\/td>\n<\/td>\n160 kb<\/td>\n750 \u00b1 160<\/td>\n<\/tr>\n
ST-0000162<\/a><\/td>\n17qtel<\/td>\n<\/td>\n848.341 \u2013 871.383<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2530<\/td>\n80.057<\/td>\n<\/td>\n170 kb<\/td>\n(154-285) \u00b1 40<\/td>\n<\/tr>\n
ST-0000163<\/a><\/td>\n18qtel<\/td>\n<\/td>\n<\/td>\n– 82.584<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000164<\/a><\/td>\n19ptel<\/td>\n1815<\/td>\n1,745.686<\/td>\n– 1,747.500<\/td>\n80 kb<\/td>\nunknown<\/td>\n<\/tr>\n
ST-0000165<\/a><\/td>\n19ptel<\/td>\n2094<\/td>\n1,721.659<\/td>\n– 1,723.752<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2400*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000166<\/a><\/td>\n19ptel<\/td>\n<\/td>\n265.605 \u2013 268.005<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n4137*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000167<\/a><\/td>\n19ptel<\/td>\n<\/td>\n249.688 \u2013 253.825<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2721<\/td>\n121.866<\/td>\n<\/td>\n160 kb<\/td>\n244 \u00b1 160<\/td>\n<\/tr>\n
ST-0000168<\/a><\/td>\n19qtel<\/td>\n<\/td>\n<\/td>\n– 124.586<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000169<\/a><\/td>\n19qtel<\/td>\n2399<\/td>\n88.475<\/td>\n– 90.874<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000170<\/a><\/td>\n20ptel<\/td>\n2616<\/td>\n365.951<\/td>\n– 368.566<\/td>\n160 kb<\/td>\n0-240<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n3133<\/td>\n109.581<\/td>\n<\/td>\n140 kb<\/td>\n62-202<\/td>\n<\/tr>\n
ST-0000171<\/a><\/td>\n20qtel<\/td>\n<\/td>\n<\/td>\n– 112.713<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-000172<\/a><\/td>\n20qtel<\/td>\n3695<\/td>\n114.557<\/td>\n– 118.251<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000173<\/a><\/td>\n20qtel<\/td>\n2166<\/td>\n140.088<\/td>\n– 142.253<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000174<\/a><\/td>\n20qtel<\/td>\n2997<\/td>\n186.460<\/td>\n– 189.456<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000175<\/a><\/td>\n21qtel<\/td>\n4370<\/td>\n47.861<\/td>\n– 52.230<\/td>\n170 kb<\/td>\n0-337<\/td>\n<\/tr>\n
ST-0000176<\/a><\/td>\n22qtel<\/td>\n3550<\/td>\n176.274<\/td>\n– 178.618<\/td>\n80 kb<\/td>\n(161-168) \u00b1 73<\/td>\n<\/tr>\n
ST-0000177<\/a><\/td>\nXptel<\/td>\n1896<\/td>\n2,329.080<\/td>\n– 2,330.975<\/td>\n175kb<\/td>\n324 \u00b1 175 (X,Y homology)8<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n3700*<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000178<\/a><\/td>\nXptel<\/td>\n<\/td>\n155.557 \u2013 159.257<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n2529<\/td>\n645.399<\/td>\n<\/td>\n170kb<\/td>\n0-258<\/td>\n<\/tr>\n
ST-0000179<\/a><\/td>\nXqtel<\/td>\n<\/td>\n<\/td>\n– 647.927<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
ST-0000180<\/a><\/td>\nYptel<\/td>\n2446<\/td>\n2,562.365<\/td>\n– 2,564.810<\/td>\n175kb<\/td>\nUnknown (X,Y homology)8<\/td>\n<\/tr>\n
ST-0000181<\/a><\/td>\nYptel<\/td>\n2000<\/td>\n2,567.816<\/td>\n– 2,569.815<\/td>\n170kb<\/td>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

\"\"<\/a><\/h3>\n
Patent Information<\/h5>\n

Previous Page<\/a><\/h3>\n
1<\/sup> scFISH probes developed from April 2003 genome draft are labeled with asterisk (*). The remaining probes were from April 01 draft except 1p (Nov 02), 2q, 3q, 4p, 5p, 6, 8q, 9p (June 02). Sequence IDs corresponding to these probes contain the UCSC database version number in the descriptions of these products.<\/h5>\n
2 Many of conventional FISH probes were developed by Knight et al. Am. J. Hum. Genet. 67: 320, 2000, and by Abbott Laboratories\/Vysis, Inc.<\/h5>\n
3<\/sup>Distance from probe to end of the telomere reported in this table is based on the length of the interval from the probe boundary coordinates to the terminal nucleotide coordinates of each chromosome end in the April 03 version of genome sequence. The computer program BLAT at the Genome Browser website (genome.ucsc.edu) was used to determine these coordinates. Due to inaccuracy in the BLAT algorithm, the coordinates of probe boundaries may differ from the actual coordinates slightly.<\/h5>\n
4<\/sup> The position of STS\/ marker associated with the conventional FISH probe was determined in the April 03 version of the genome sequence. Often a single STS\/ marker is identified on a clone. There is insufficient information available to determine the positions of STS markers on some of these clones. As a result, error in positioning a probe on the chromosome (ie. \u00b1 ) is generally the size of the clone provided in: American Journal of Human Genetics 67: <\/em>p. 320, 2000, and by Abbott\/Vysis, Inc . A standard deviation less than the estimated clone size indicates that more than one STS was localized to the clone.<\/h5>\n
6 <\/sup>Indicates clones with cross hybridizations to other chromosomes.<\/h5>\n
7 Probe recognizes a neighboring paralogous sequence in addition to the known interval.<\/h5>\n
8<\/sup> Reported STS located on X chromosome only, but both commercial probes for sex chromosomes show homology with each other.<\/h5>\n
9<\/sup> Probe detect four paralogs: three of which are on chromosome 9 and one which is on chromosome 2.<\/h5>\n
unknown = Reported STS\/ markers could not be placed on genome sequence as they could not be located in all available genome databases or through communication with authors.<\/h5>\n
^hybridization was detected when probe was combined with other 10ptel probes labeled with \u201c^\u201d.<\/h5>\n
+ hybridization was detected when probe was combined with other 10ptel probes labeled with \u201c+\u201d.<\/h5>\n


\n
\n<\/span><\/p>\n","protected":false},"excerpt":{"rendered":"

  Chr. Target   scFISH probes1  Competitor Recombinant probes2 Catalog Number Chr Length(bp) Distance from Telomere (kb)3  Estimated clone size Approx distance of STS from telomere (kb)4 ST-0000131 8ptel 2271 455.377 \u2013 457.645 2154 71.870 – 74.023 100 kb6 194 \u00b1 100 ST-0000132 8qtel ST-0000133 8qtel 2949 145.868 \u2013 148.816 ST-0000134 9ptel 1754 243.057 \u2013 […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"","meta":[],"tags":[],"_links":{"self":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1979"}],"collection":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1979"}],"version-history":[{"count":15,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1979\/revisions"}],"predecessor-version":[{"id":4835,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1979\/revisions\/4835"}],"wp:attachment":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1979"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1979"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}