{"id":1780,"date":"2011-05-18T14:31:24","date_gmt":"2011-05-18T14:31:24","guid":{"rendered":"\/?page_id=1780"},"modified":"2011-05-20T13:08:26","modified_gmt":"2011-05-20T13:08:26","slug":"standard-fishcontinued","status":"publish","type":"page","link":"https:\/\/www.cytognomix.com\/?page_id=1780","title":{"rendered":"Standard Fish Probes Catalog (Continued)"},"content":{"rendered":"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Chromosome \/Disorder<\/strong><\/td>\nCatalog Number<\/strong><\/td>\nGenBank Accession<\/strong><\/td>\nGene <\/strong><\/td>\nInterval<\/strong><\/td>\nCytogenetic nomenclature<\/strong><\/td>\n<\/tr>\n
16\/AML-M4<\/td>\nST-0000034<\/a><\/td>\nNT_000691<\/td>\nPM53<\/td>\n~20 kb downstream<\/a><\/td>\nish inv(16)(p13q22)(PM5 sp)<\/td>\n<\/tr>\n
(Acute Myelogenous leukemia – M4)<\/td>\nST-0000035<\/a><\/td>\nNT_000691<\/td>\nPM53<\/sup><\/td>\n~60 kb downstream<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000036<\/a><\/td>\nNT_000691<\/td>\nPLA2G10<\/sup>3<\/sup> <\/p>\n

PKD<\/p>\n

PM5<\/td>\n

IVS 3 <\/p>\n

IVS 12-Exon 15<\/p>\n

~100 kb upstream<\/td>\n

ish inv(16)(p13q22)(PLA2G10 mv, PKD mv, PM5 sp)<\/td>\n<\/tr>\n
<\/td>\nST-0000037<\/a><\/td>\nNT_000691<\/td>\nPLA2G10<\/sup>3<\/sup> <\/p>\n

PKD<\/p>\n

PM5<\/td>\n

IVS 3 <\/p>\n

Exon 15-IVS 20<\/p>\n

~100 kb upstream & ~300 kb downstream<\/td>\n

<\/td>\n<\/tr>\n
<\/td>\nST-0000038<\/a><\/td>\nNT_025903<\/td>\nABCC1\/MDR1<\/td>\nIVS 6<\/a><\/td>\nish inv (16)(p13q22)(ABCC1st)<\/td>\n<\/tr>\n
16\/Ruben- stein-Taybi Sx<\/td>\nST-0000039<\/a><\/td>\nNT_000671<\/td>\nCREBBP<\/td>\nIVS 19 \u2013 IVS 20<\/td>\nish del(16)(p13.3)(CREBBP-)<\/td>\n<\/tr>\n
<\/td>\nST-0000040<\/a><\/td>\nNT_000671<\/td>\nCREBBP<\/td>\nIVS 19<\/td>\n<\/td>\n<\/tr>\n
17\/Smith- Magenis Sx<\/td>\nST-0000041<\/a><\/td>\nNT_000770<\/td>\nADORA2B<\/sup>4<\/td>\nPromoter-IVS 1<\/a><\/td>\nish del (17)(p11.2p11.2)(ADORA2B-)<\/td>\n<\/tr>\n
<\/td>\nST-0000042<\/a><\/td>\nNT_000770<\/td>\nADORA2B4<\/sup><\/td>\nIVS 1<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000043<\/a><\/td>\nU80184<\/td>\nFLI1<\/td>\nIVS 12-IVS 14<\/a><\/td>\nish del (17)(p11.2p11.2)(FLI1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000044<\/a><\/td>\nU80184<\/td>\nFLI1<\/td>\nIVS 15-Exon 21<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000045<\/a><\/td>\nNT_000760<\/td>\nMFAP4<\/td>\nIVS 2 – 3 UTR<\/a><\/td>\nish del(17)(p11.2p11.2)(MFAP4-)<\/td>\n<\/tr>\n
<\/td>\nST-0000046<\/a><\/td>\nAL035367<\/td>\nZNF179-PAIP1; <\/p>\n

LLGL\/HUGL;<\/p>\n

SHMT1<\/td>\n

Between ZNF179 PAIP1; IVS7-Exon 13<\/a>; IVS 4<\/td>\nishdel (17)(p11.2p11.2) (ZNF179\/PAIP1\/SHMT1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000047<\/a><\/td>\nAL035367<\/td>\nLLGL\/HUGL<\/td>\nPromoter \u2013Exon 1 <\/p>\n

Promoter \u2013 IVS1<\/td>\n

ish del(17)(p11.2p11.2)(LGLL\/HUGL-)<\/td>\n<\/tr>\n
17\/Charcot- <\/p>\n

Marie\u2013Tooth 1A<\/td>\n

ST-0000048<\/a><\/td>\nAC005703<\/td>\nPMP22<\/em><\/td>\nPromoter<\/a> <\/p>\n

(~5 kb upstream)<\/td>\n

ish dup(17)(p11.2p11.2)( PMP22++)<\/td>\n<\/tr>\n
<\/td>\nST-0000049<\/a><\/td>\nAC005703<\/td>\nPMP22<\/td>\nIVS 3<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000050<\/a><\/td>\nAC005703<\/td>\nPMP224<\/td>\nIVS 3<\/a><\/td>\n<\/td>\n<\/tr>\n
17\/ Miller-Dieker Sx<\/td>\nST-0000051<\/a><\/td>\nNT_000774<\/td>\nPAFAH1B1<\/em><\/td>\n~5kb downstream<\/a><\/td>\nish del(17)(p13.3)(PAFAH1B1\/EIF-3-) <\/p>\n

<\/em><\/p>\n

<\/em><\/td>\n<\/tr>\n

<\/td>\n<\/td>\n<\/td>\nEIF-35<\/em><\/td>\nIVS 24\u2013IVS 27<\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000052<\/a><\/td>\nNT_000774<\/td>\nPAFAH1B1<\/em><\/td>\n~7-8 kb downstream<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\n<\/td>\n<\/td>\nEIF-3<\/em>5<\/sup><\/em><\/sup><\/em> <\/p>\n

<\/em><\/em><\/td>\n

IVS 15-IVS 19<\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000053<\/a><\/td>\nNT_000774<\/td>\nPAFAH1B1<\/em><\/td>\n~13 kb downstream<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000054<\/a><\/td>\n<\/td>\nEIF-3<\/em>5<\/em> <\/em><\/sup><\/em> <\/p>\n

<\/em><\/td>\n

IVS 5-IVS 11<\/td>\n<\/td>\n<\/tr>\n
Alagille Sx<\/td>\nST-0000055<\/a><\/td>\nAL035456.24<\/td>\nJAG1<\/td>\nIVS 2-IVS 3<\/a><\/td>\nish del(20)(p12.3p12.3)(JAG1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000056<\/a><\/td>\nAL035456.24<\/td>\nJAG1<\/td>\nIVS 5-IVS 8<\/a><\/td>\n<\/td>\n<\/tr>\n
21\/Down Sx<\/td>\nST-0000057<\/a><\/td>\nAP000160<\/td>\nDSCR4<\/em><\/td>\n~39 kb upstream<\/a><\/td>\nish (21)(q22.2q22.3)(DSCR4x3)<\/td>\n<\/tr>\n
<\/td>\nST-0000058<\/a><\/td>\nAP000160<\/td>\nDSCR4<\/td>\n~30 kb upstream<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000059<\/a><\/td>\nAP000160<\/td>\nDSCR4<\/td>\n~20 kb upstream<\/a><\/td>\n<\/td>\n<\/tr>\n
21\/ ALL<\/td>\nST-0000060<\/a><\/td>\nAP000057<\/td>\nAML1\/RUNX<\/td>\nPromoter-exon 1<\/a><\/td>\nish t(12;21)(p13;q22)(AML1 st)<\/td>\n<\/tr>\n
22\/ DiGeorge Sx<\/td>\nST-0000061<\/a><\/td>\nNT_001039<\/td>\nHIRA<\/td>\nIVS 21-IVS 24<\/a><\/td>\nish del(22)(q11.2)(HIRA-)<\/td>\n<\/tr>\n
<\/td>\nST-0000062<\/a><\/td>\nNT_001039<\/td>\nHIRA<\/td>\nIVS 13-IVS 15<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000063<\/a><\/td>\nNT_001039<\/td>\nHIRA<\/td>\nIVS 12-IVS 13<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000064<\/a><\/td>\nNT_001039<\/td>\nHIRA<\/td>\nIVS 2-IVS 4<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000065<\/a><\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/td>\n<\/tr>\n
22\/CML; ALL<\/td>\nST-0000066<\/a><\/td>\nU07000<\/td>\nBCR<\/td>\nProximal to major <\/p>\n

breakpoint in CML<\/td>\n

ish t(9;22)(q34;q11.2)(BCR st)<\/td>\n<\/tr>\n
<\/td>\nST-0000067<\/a><\/td>\nU07000<\/td>\nBCR<\/td>\nProximal to major breakpoint in CML<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000069<\/a><\/td>\nU07000<\/td>\nBCR<\/td>\nIVS 8<\/a><\/td>\nish t(9;22)(q34;q11.2)(BCR mv)<\/td>\n<\/tr>\n
X\/ Kallman Sx<\/td>\nST-0000070<\/a><\/td>\nNT_ 001457<\/td>\nGS2<\/td>\nPromoter- IVS 2<\/a><\/td>\nish del(X)(p22.31)(GS2-)<\/td>\n<\/tr>\n
<\/td>\nST-0000071<\/a><\/td>\nAC006062<\/td>\nKAL1<\/td>\nIVS 6-IVS 7<\/a><\/td>\nish del(X)(p22.31)(KAL1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000072<\/a><\/td>\nAC006062<\/td>\nKAL1<\/td>\n~8 kb downstream<\/a><\/td>\n<\/td>\n<\/tr>\n
X\/ Turner; Leri- Weill Sx<\/td>\nST-0000073<\/a><\/td>\nNT_001151<\/td>\nSHOX<\/td>\nIVS 2- exon 3<\/a><\/td>\nish del(X)(p22.33)(SHOX-)<\/td>\n<\/tr>\n
<\/td>\nST-0000074<\/a><\/td>\nNT_001151<\/td>\nSHOX<\/td>\nIVS 4<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000075<\/a><\/td>\nNT_001151<\/td>\nSHOX<\/td>\nIVS 6<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000076<\/a><\/td>\nNT_001159<\/td>\nTBL1<\/td>\nIVS 3<\/a><\/td>\nish del(X)(p22.22-22.31)(TBL1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000077<\/a><\/td>\nNT_001159<\/td>\nTBL1<\/td>\nExon 15- 3<\/a><\/td>\n <\/p>\n

 <\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

<\/p>\n

Previous Page<\/a><\/h3>\n

** WWW hyperlinks are to localized probe sequence in ContigView browser (v9.30a.1; 2 December 2002) at http:\/\/www.ensembl.org\/Homo_sapiens\/<\/a><\/strong><\/p>\n

<\/strong><\/p>\n

<\/strong><\/p>\n","protected":false},"excerpt":{"rendered":"

Chromosome \/Disorder Catalog Number GenBank Accession Gene Interval Cytogenetic nomenclature 16\/AML-M4 ST-0000034 NT_000691 PM53 ~20 kb downstream ish inv(16)(p13q22)(PM5 sp) (Acute Myelogenous leukemia – M4) ST-0000035 NT_000691 PM53 ~60 kb downstream ST-0000036 NT_000691 PLA2G103  PKD PM5 IVS 3  IVS 12-Exon 15 ~100 kb upstream ish inv(16)(p13q22)(PLA2G10 mv, PKD mv, PM5 sp) ST-0000037 NT_000691 PLA2G103  PKD […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"","meta":[],"tags":[],"_links":{"self":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1780"}],"collection":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1780"}],"version-history":[{"count":22,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1780\/revisions"}],"predecessor-version":[{"id":2175,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1780\/revisions\/2175"}],"wp:attachment":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1780"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1780"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}