{"id":1778,"date":"2011-05-18T14:23:15","date_gmt":"2011-05-18T14:23:15","guid":{"rendered":"\/?page_id=1778"},"modified":"2013-08-14T03:22:51","modified_gmt":"2013-08-14T03:22:51","slug":"standard-fish","status":"publish","type":"page","link":"https:\/\/www.cytognomix.com\/?page_id=1778","title":{"rendered":"Standard Fish Probes Catalog"},"content":{"rendered":"

scFISH probes used to detect cytogenetic abnormalities associated with genomic disorders<\/h3>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Chromosome \/Disorder<\/strong><\/td>\nCatalog Number<\/strong><\/td>\nGenBank Accession <\/strong><\/td>\nGene <\/strong><\/td>\nInterval**<\/strong><\/td>\nCytogenetic nomenclature<\/strong><\/td>\n<\/tr>\n
1\/Monosomy 1p36 Sx<\/td>\nST-0000001<\/a><\/td>\nAL031282<\/td>\nCDC2L1<\/td>\nIVS 11-3 UTR<\/a><\/td>\nish del (1)(p36.3)(CDC2L1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000002<\/a><\/td>\nAL031282<\/td>\nCDC2L1<\/em><\/td>\n3 UTR<\/a><\/td>\n<\/td>\n<\/tr>\n
4\/ Wolf-Hirschorn Sx<\/td>\nST-0000003<\/a><\/td>\nNT_000102<\/td>\nHD<\/em><\/td>\nExon 67 \u2013 0.2 kb downstream<\/a><\/td>\nish del (4)(p16.3)(HD-)<\/td>\n<\/tr>\n
5\/Cri-du-Chat Sx<\/td>\nST-0000004<\/a><\/td>\nNT_000149<\/td>\nCTNND2<\/em><\/td>\nIVS 17<\/a><\/td>\nish del (5)(p15.2)(CTNND2-)<\/td>\n<\/tr>\n
<\/td>\nST-0000005<\/a><\/td>\nNT_000149<\/td>\nCTNND2<\/em><\/td>\nIVS 14<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000006<\/a><\/td>\nNT_000149<\/td>\nCTNND2<\/em><\/td>\nIVS 13<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000007<\/a><\/td>\nNT_000147<\/td>\nSEMA5A<\/em><\/td>\nIVS 3<\/a><\/td>\nish del (5)(p15.31)(SEMA5A-)<\/td>\n<\/tr>\n
<\/td>\nST-0000008<\/a><\/td>\nNT_000147<\/td>\nSEMA5A<\/em><\/td>\nIVS 3<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000009<\/a><\/td>\nNT_000147<\/td>\nSEMA5A<\/em><\/td>\nIVS 3<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000010<\/a><\/td>\nAF119117<\/td>\nSLC6A3<\/em><\/td>\nIVS 3<\/a><\/td>\nish del (5)(p15.33)(SLC6A3-)<\/td>\n<\/tr>\n
7\/Williams Sx<\/td>\nST-0000011<\/a><\/td>\nNT_000398<\/td>\nL1MK1 <\/em><\/td>\nIVS 2<\/a><\/td>\nish del(7)(q11.23q11.23)(LIMK1-)<\/td>\n<\/tr>\n
<\/td>\nST-0000012<\/a><\/td>\nNT_000398<\/td>\nL1MK1<\/td>\nIVS 13-3UTR <\/a><\/td>\n<\/td>\n<\/tr>\n
8\/Langer-<\/td>\nST-0000013<\/a><\/td>\nNT_002886<\/td>\nTRPS1<\/em><\/td>\nIVS 1<\/a><\/td>\nish del(8)(q23.3q24.1)(TRPS1-)<\/td>\n<\/tr>\n
Giedeon Sx<\/td>\nST-0000014<\/a><\/td>\nNT_002886<\/td>\nTRPS1<\/em><\/td>\nIVS 1<\/a><\/td>\n<\/td>\n<\/tr>\n
9\/CML<\/td>\nST-0000015<\/a><\/td>\n <\/strong>U07561<\/td>\nABL1<\/em><\/td>\nExon 1b-IVS 1b<\/a><\/td>\nish t(9;22)(q34;q11.2)(ABL st)<\/td>\n<\/tr>\n
(Chronic myelogenous leukemia)<\/td>\nST-0000016<\/a><\/td>\nU07562<\/td>\nABL1<\/em><\/td>\nIVS 1b<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000017<\/a><\/td>\nU07563<\/td>\nABL1<\/em><\/td>\nIVS 3<\/a><\/sup><\/td>\nish t(9;22)(q34;q11.2)(ABL mv)<\/td>\n<\/tr>\n
<\/td>\nST-0000018<\/a><\/td>\nU07563<\/td>\nABL1<\/em><\/td>\nIVS 3<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000019<\/a><\/td>\nU07563<\/td>\nABL1<\/em><\/td>\nIVS 4-IVS 6<\/a><\/td>\nish t(9;22)(q34;q11.2)(ABL mv)<\/td>\n<\/tr>\n
<\/td>\nST-0000020<\/a><\/td>\nU07563<\/td>\nABL1<\/em><\/td>\nExon 11-IVS 11<\/a><\/td>\n<\/td>\n<\/tr>\n
12\/ALL (Acute lymphocytic leukemia)<\/td>\nST-0000021<\/a><\/td>\nNT_000601<\/td>\nTEL\/ETV6<\/td>\nIVS2<\/a><\/td>\nish t(12;21)(p13;q22)(TEL sp)<\/td>\n<\/tr>\n
<\/td>\nST-0000022<\/a><\/td>\nNT_000601<\/td>\nTEL\/ETV6<\/td>\nIVS3<\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000023<\/a><\/td>\nNT_000601<\/td>\nTEL\/ETV6<\/td>\nIVS5-IVS6<\/a><\/td>\n<\/td>\n<\/tr>\n
13\/ Aneuploidy<\/td>\nST-0000024<\/a><\/td>\nAL355338<\/td>\nZIC2<\/td>\n~5.8 kb downstream<\/a><\/td>\nish del(13)(q32)(ZIC2-) or<\/td>\n<\/tr>\n
<\/td>\nST-0000025<\/a><\/td>\nAL355338<\/td>\nZIC2<\/td>\n~2 kb upstream<\/a><\/td>\nish del(13)(q32)(ZIC2x3)<\/td>\n<\/tr>\n
15\/Prader-Willi, Angelman & Duplication Sx<\/td>\nST-0000026<\/a><\/td>\nAC004600<\/td>\nUBE3A<\/td>\nIVS 8-IVS 9<\/a><\/td>\nish del(15)(q11.2q11.2)(UBE3A-)<\/td>\n<\/tr>\n
<\/td>\nST-0000027<\/a><\/td>\nAC004737<\/td>\nIC\/SNRPN<\/td>\nIVS 3 to Exon u1B2<\/sup><\/a><\/td>\nish del(15)(q11.2q11.2)(IC\/ SNRPN-)<\/td>\n<\/tr>\n
<\/td>\nST-0000028<\/a><\/td>\nU41384.1<\/td>\nSNRPN<\/em><\/td>\nPromoter \u2013 IVS 1<\/a><\/td>\nish dup(15)(q11.2q13)(UBE3A++,<\/td>\n<\/tr>\n
<\/td>\nST-0000029<\/a><\/td>\nAC004737<\/td>\nIC\/SNRPN<\/em><\/td>\nIVS 5-Exon u1B2<\/sup>-IVS 3<\/a><\/td>\nIC\/SNRPN++), and ish dic(15q11.2q13) (UBE3A++,IC\/SNRPN++)<\/td>\n<\/tr>\n
<\/td>\nST-0000030<\/a><\/td>\nAC004737<\/td>\nIC\/SNRPN<\/em><\/td>\nIVS 5-Exon u1B <\/a><\/td>\n<\/td>\n<\/tr>\n
<\/td>\nST-0000031<\/a><\/td>\nAC006596<\/td>\nMAGEL2<\/em><\/td>\nCDS- 3 UTR-2 kb downstream<\/a><\/td>\nish del(15)(q11.1q11.2)(MAGEL2-) or<\/td>\n<\/tr>\n
<\/td>\nST-0000032<\/a><\/td>\nAC006596<\/td>\nMAGEL2<\/em><\/td>\n~4 kb downstream<\/a><\/td>\nish dup (15)(q11.2q11.2)(MAGEL2++)<\/td>\n<\/tr>\n
<\/td>\nST-0000033<\/a><\/td>\nAC006596<\/td>\nMAGEL2<\/em><\/td>\n~22 kb downstream<\/a><\/td>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

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Next Page<\/a><\/h3>\n

** WWW hyperlinks are to localized probe sequence in ContigView browser (v9.30a.1; 2 December 2002) at http:\/\/www.ensembl.org\/Homo_sapiens\/<\/a><\/p>\n

 <\/p>\n

 <\/p>\n","protected":false},"excerpt":{"rendered":"

scFISH probes used to detect cytogenetic abnormalities associated with genomic disorders Chromosome \/Disorder Catalog Number GenBank Accession Gene Interval** Cytogenetic nomenclature 1\/Monosomy 1p36 Sx ST-0000001 AL031282 CDC2L1 IVS 11-3 UTR ish del (1)(p36.3)(CDC2L1-) ST-0000002 AL031282 CDC2L1 3 UTR 4\/ Wolf-Hirschorn Sx ST-0000003 NT_000102 HD Exon 67 \u2013 0.2 kb downstream ish del (4)(p16.3)(HD-) 5\/Cri-du-Chat Sx […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":[],"tags":[],"_links":{"self":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1778"}],"collection":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1778"}],"version-history":[{"count":16,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1778\/revisions"}],"predecessor-version":[{"id":2803,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=\/wp\/v2\/pages\/1778\/revisions\/2803"}],"wp:attachment":[{"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1778"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.cytognomix.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1778"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}