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[370,1,371,1],[374,1,375,1],[372,1,373,1],[376,1,377,1],[346,1,347,1],[348,1,349,1],[352,1,353,1],[346,0,355,0],[354,1,355,1],[356,0,359,0],[356,1,359,1],[510,0,511,0],[510,1,511,1],[502,0,503,0],[386,1,389,1],[394,0,423,0],[420,1,423,1],[380,0,381,0],[364,1,367,1],[394,1,397,1],[398,1,401,1],[402,1,405,1],[368,0,379,0],[368,1,369,1],[406,1,407,1],[408,1,409,1],[410,1,411,1],[384,1,385,1],[382,1,383,1],[484,0,487,0],[486,1,487,1],[502,1,503,1],[504,1,505,1],[506,1,507,1],[504,0,509,0],[508,1,509,1],[490,1,493,1],[488,0,499,0],[494,1,499,1],[446,1,447,1],[476,1,477,1],[452,1,455,1],[448,0,455,0],[448,1,449,1],[456,1,459,1],[456,0,463,0],[460,1,463,1],[470,0,471,0],[470,1,471,1],[472,0,475,0],[472,1,475,1],[732,0,733,0],[732,1,733,1],[314,0,315,0],[314,1,315,1],[82,0,83,0],[82,1,83,1],[666,1,667,1],[666,0,669,0],[668,1,669,1],[130,1,131,1],[186,0,193,0],[692,0,693,0],[692,1,693,1],[694,1,695,1],[704,1,705,1],[696,1,699,1],[662,1,663,1],[662,0,665,0],[664,1,665,1],[674,1,675,1],[676,1,677,1],[678,1,679,1],[612,1,613,1],[616,1,617,1],[384,0,385,0],[386,0,389,0],[618,1,619,1],[618,0,633,0],[632,1,633,1],[622,1,623,1],[620,1,621,1],[624,1,625,1],[592,1,593,1],[594,1,597,1],[598,1,599,1],[600,1,603,1],[604,1,607,1],[592,0,611,0],[608,1,611,1],[612,0,615,0],[614,1,615,1],[436,0,441,0],[440,1,441,1],[466,1,467,1],[442,1,443,1],[444,1,445,1],[442,0,447,0],[484,1,485,1],[436,1,437,1],[438,1,439,1],[168,0,171,0],[168,1,171,1],[284,0,285,0],[284,1,285,1],[172,0,175,0],[172,1,175,1],[432,0,433,0],[432,1,433,1],[434,0,435,0],[434,1,435,1],[428,0,431,0],[430,1,431,1],[378,1,379,1],[380,1,381,1],[412,1,415,1],[416,1,417,1],[418,1,419,1],[424,0,427,0],[426,1,427,1],[428,1,429,1],[424,1,425,1],[336,1,339,1],[706,0,707,0],[706,1,707,1],[320,1,321,1],[584,1,585,1],[588,1,589,1],[590,1,591,1],[580,1,581,1],[572,1,573,1],[574,1,575,1],[578,1,579,1],[476,0,483,0],[482,1,483,1],[450,1,451,1],[464,0,467,0],[464,1,465,1],[468,0,469,0],[468,1,469,1],[514,1,515,1],[530,1,531,1],[512,1,513,1],[516,1,521,1],[488,1,489,1],[478,1,479,1],[480,1,481,1],[176,3,177,3],[178,3,179,3],[180,3,181,3],[182,3,183,3],[184,3,185,3],[186,3,187,3],[188,3,189,3],[190,3,191,3],[192,3,193,3],[194,3,195,3],[196,3,197,3],[198,3,199,3],[200,3,201,3],[202,3,203,3],[204,3,205,3],[206,3,207,3],[208,3,209,3],[210,3,211,3],[212,3,213,3],[214,3,215,3],[216,3,217,3],[218,3,219,3],[220,3,221,3],[222,3,223,3],[224,3,225,3],[226,3,227,3],[228,3,229,3],[230,3,231,3],[232,3,233,3],[234,3,235,3],[236,3,237,3],[238,3,239,3],[240,3,241,3],[242,3,243,3],[244,3,245,3],[246,3,247,3],[248,3,249,3],[250,3,251,3],[252,3,253,3],[254,3,255,3],[258,3,259,3],[256,3,257,3],[260,3,261,3],[262,3,263,3],[264,3,265,3],[266,3,267,3],[268,3,269,3],[270,3,271,3],[272,3,273,3],[274,3,275,3],[276,3,277,3],[278,3,279,3],[280,3,281,3],[282,3,283,3],[284,3,285,3],[286,3,287,3],[288,3,289,3],[290,3,291,3],[292,3,293,3],[294,3,295,3],[296,3,297,3],[298,3,299,3],[300,3,301,3],[302,3,303,3],[304,3,305,3],[306,3,307,3],[308,3,309,3],[310,3,311,3],[312,3,313,3],[314,3,315,3],[316,3,317,3],[318,3,319,3],[320,3,321,3],[322,3,323,3],[324,3,325,3],[326,3,327,3],[328,3,329,3],[330,3,331,3],[332,3,333,3],[334,3,335,3],[336,3,337,3],[338,3,339,3],[340,3,341,3],[342,3,343,3],[344,3,345,3],[346,3,347,3],[348,3,349,3],[350,3,351,3],[352,3,353,3],[354,3,355,3],[356,3,357,3],[358,3,359,3],[360,3,361,3],[362,3,363,3],[364,3,365,3],[366,3,367,3],[368,3,369,3],[370,3,371,3],[372,3,373,3],[374,3,375,3],[376,3,377,3],[378,3,379,3],[380,3,381,3],[382,3,383,3],[384,3,385,3],[386,3,387,3],[388,3,389,3],[390,3,391,3],[392,3,393,3],[394,3,395,3],[396,3,397,3],[398,3,399,3],[400,3,401,3],[402,3,403,3],[404,3,405,3],[406,3,407,3],[408,3,409,3],[410,3,411,3],[412,3,413,3],[414,3,415,3],[416,3,417,3],[418,3,419,3],[420,3,421,3],[422,3,423,3],[424,3,425,3],[426,3,427,3],[428,3,429,3],[430,3,431,3],[432,3,433,3],[434,3,435,3],[436,3,437,3],[438,3,439,3],[440,3,441,3],[442,3,443,3],[444,3,445,3],[446,3,447,3],[448,3,449,3],[450,3,451,3],[452,3,453,3],[454,3,455,3],[456,3,457,3],[458,3,459,3],[460,3,461,3],[462,3,463,3],[464,3,465,3],[466,3,467,3],[468,3,469,3],[470,3,471,3],[472,3,473,3],[474,3,475,3],[476,3,477,3],[478,3,479,3],[480,3,481,3],[482,3,483,3],[484,3,485,3],[486,3,487,3],[488,3,489,3],[490,3,491,3],[492,3,493,3],[494,3,495,3],[496,3,497,3],[498,3,499,3],[500,3,501,3],[502,3,503,3],[504,3,505,3],[506,3,507,3],[508,3,509,3],[510,3,511,3],[512,3,513,3],[514,3,515,3],[516,3,517,3],[518,3,519,3],[520,3,521,3],[522,3,523,3],[524,3,525,3],[526,3,527,3],[528,3,529,3],[530,3,531,3],[532,3,533,3],[534,3,535,3],[536,3,537,3],[538,3,539,3],[540,3,541,3],[542,3,543,3],[544,3,545,3],[546,3,547,3],[548,3,549,3],[550,3,551,3],[552,3,553,3],[554,3,555,3],[556,3,557,3],[558,3,559,3],[560,3,561,3],[562,3,563,3],[564,3,565,3],[566,3,567,3],[568,3,569,3],[570,3,571,3],[572,3,573,3],[574,3,575,3],[576,3,577,3],[578,3,579,3],[580,3,581,3],[582,3,583,3],[584,3,585,3],[586,3,587,3],[588,3,589,3],[590,3,591,3],[592,3,593,3],[594,3,595,3],[596,3,597,3],[598,3,599,3],[600,3,601,3],[602,3,603,3],[604,3,605,3],[606,3,607,3],[608,3,609,3],[610,3,611,3],[612,3,613,3],[614,3,615,3],[616,3,617,3],[618,3,619,3],[620,3,621,3],[622,3,623,3],[624,3,625,3],[626,3,627,3],[628,3,629,3],[630,3,631,3],[632,3,633,3],[634,3,635,3],[636,3,637,3],[638,3,639,3],[640,3,641,3],[642,3,643,3],[644,3,645,3],[646,3,647,3],[648,3,649,3],[650,3,651,3],[652,3,653,3],[654,3,655,3],[656,3,657,3],[658,3,659,3],[660,3,661,3],[662,3,663,3],[664,3,665,3],[666,3,667,3],[668,3,669,3],[670,3,671,3],[672,3,673,3],[674,3,675,3],[676,3,677,3],[678,3,679,3],[680,3,681,3],[682,3,683,3],[684,3,685,3],[686,3,687,3],[688,3,689,3],[690,3,691,3],[692,3,693,3],[694,3,695,3],[696,3,697,3],[698,3,699,3],[700,3,701,3],[702,3,703,3],[704,3,705,3],[706,3,707,3],[708,3,709,3],[710,3,711,3],[712,3,713,3],[714,3,715,3],[734,3,735,3],[736,3,737,3],[738,3,739,3],[716,3,717,3],[718,3,719,3],[720,3,721,3],[722,3,723,3],[724,3,725,3],[726,3,727,3],[728,3,729,3],[730,3,731,3],[732,3,733,3]]}
[null,"Supplementary Table S2 - Cofactor binding motifs"]
["TFs","Datasets","Sequence logos of iPWMs showing cofactor motifs","F-test values"]
["ARID3A","HepG2, Stanford\n(optimal IDR-thresholded dataset)","Top 500 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 5000 peaks (FOXA motif)",1190]
[]
["ATF1","K562, HMS\n(optimal IDR-thresholded dataset)","All 14818 peaks (IRF motif)",314]
[]
["ATF2","H1-hESC, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 2500 peaks (SP motif)",438]
[]
["ATF3","GM12878, HAIB\nProtocol: PCR1x\n(SPP dataset)","All 1860 peaks (USF motif)",1360]
[]
[null,"GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 1670 peaks (SP motif)",65.7]
[]
[null,null,"1550 peaks (USF motif), after masking the SP motif ",513]
[]
[null,"H1-hESC, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 4803 peaks (SP motif)",127]
[]
[null,null,"4697 peaks (USF motif), after masking the SP motif ",887]
[]
[null,"HepG2, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 3284 peaks (SP motif)",78.3]
[]
[null,null,"3209 peaks (USF motif), after masking the SP motif ",391]
[]
[null,"K562, HAIB, Replicate 1\nProtocol: v041610.1\n(initial peak dataset)","All 11098 peaks (SP motif)",1510]
[]
[null,"K562, HMS\n(optimal IDR-thresholded dataset)","All 1232 peaks (SP motif)",1870]
[]
[null,null,"1210 peaks (USF motif), after masking the SP motif ",1460]
[]
["BAF155/\nSMARCC1","HeLa-S3, Stanford\n(SPP dataset)","All 4448 peaks (AP1 motif)",1280]
[]
["BAF170/\nSMARCC2","HeLa-S3, Stanford\n(SPP dataset)","1342 peaks (AP1 motif), after using masking ",129]
[]
["BCL11A","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 17809 peaks (IRF motif)",109]
[]
[null,null,"17321 peaks (RUNX motif), after masking the IRF motif",3620]
[]
[null,"H1-hESC, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 2513 peaks (SOX2-OCT4 motif)",12.1]
[]
["BCL3","A549, HAIB\nProtocol: v042211.1\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","All 7707 peaks (AP1 motif), after masking noise",647]
[]
["BCLAF1","GM12878, HAIB, Replicate 2\nProtocol: v041610.1\n(initial peak dataset)","Top 500 peaks (SP motif)",1080]
[]
[null,"K562, HAIB, Replicate 1\nProtocol:PCR1x\n(initial peak dataset)","All 2297 peaks (SP motif)",912]
[]
[null,"K562, HAIB, Replicate 2\nProtocol:PCR1x\n(initial peak dataset)","All 2362 peaks (SP motif)",869]
[]
["BDP1","H1-hESC, HMS\n(optimal IDR-thresholded dataset)","All 507 peaks (B-Box motif)",61.5]
[]
[null,"K562, HMS\n(optimal IDR-thresholded dataset)","All 569 peaks (A-Box motif)",54.1]
[]
["BHLHE32/MITF","K562, HAIB\n(optimal IDR-thresholded dataset)","Top 4500 peaks (SP motif)",604]
[]
["BRCA1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 550 peaks (ZBTB33 motif)",128]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 1999 peaks (SP motif)",111]
[]
[null,null,"Top 1000 peaks (ZBTB33 motif)",379]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 8081 peaks (SP motif)",754]
[]
[null,null,"Top 500 peaks (ZBTB33 motif)","N/A"]
[]
[null,null,"Top 800 peaks (ZBTB33 motif)",1340]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 1489 peaks (SP motif)",92.2]
[]
[null,null,"Top 800 peaks (ZBTB33 motif)",212]
[]
["BRF1","HeLa-S3, HMS\n(optimal IDR-thresholded dataset)","All 192 peaks (B-Box motif)",69.8]
[]
[null,null,"192 peaks (A-Box motif), after masking the B-Box motif",60.2]
[]
[null,"K562, HMS\n(optimal IDR-thresholded dataset)","All 217 peaks (B-Box motif)",35.700000000000003]
[]
[null,null,"220 peaks (A-Box motif), after masking the B-Box motif",12.5]
[]
["BRG1","HeLa-S3, Yale\n(SPP dataset)","All 316 peaks (AP1 motif), after using masking",320]
[]
[null,"K562, Stanford\n(SPP dataset)","All 1544 peaks (GATA motif)",1220]
[]
["CBX1","HepG2, HAIB\n(conservative IDR-thresholded dataset)","All 708 peaks (SP motif)",25.2]
[]
["CCNT2","K562, HMS\n(optimal IDR-thresholded dataset)","All 19951 peaks (SP motif)",3020]
[]
["CEBPB","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 5774 peaks (IRF motif)",421]
[]
[null,null,"5759 peaks (RUNX motif), after masking the IRF motif",738]
[]
["CEBPD","HepG2, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 11382 peaks (SP motif)",1620]
[]
["CHD1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","Top 2000 peaks (SP motif)",1010]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 2184 peaks (SP motif)",1950]
[]
[null,"H1-hESC, Broad\n(optimal IDR-thresholded dataset)","All 7226 peaks (SP motif)",2470]
[]
["CHD2","HeLa-S3, Stanford\n(initial peak dataset)","All 35861 peaks (SP motif)",2930]
[]
[null,"HepG2, Stanford\n(initial peak dataset)","All 28621 peaks (SP motif)",3930]
[]
[null,"K562, Stanford\n(initial peak dataset)","All 29104 peaks (SP motif)",3480]
[]
["DDX20","K562, Stanford\nTarget: eGFP-DDX20\n(optimal IDR-thresholded dataset)","All 3773 peaks (YY motif)",18.7]
[]
["DEAF1","K562, HAIB\n(optimal IDR-thresholded dataset)","All 2493 peaks (SP motif)",195]
[]
[null,null,"All 2498 peaks (ZNF143 motif)",3.67]
[]
[null,null,"Top 1500 peaks (ZNF143 motif)","N/A"]
[]
["DIDO1","K562, Stanford\nTarget: eGFP-DIDO1\n(optimal IDR-thresholded dataset)","All 5668 peaks (SP motif)",57]
[]
[null,null,"Top 1000 peaks (ETS motif)",870]
[]
["FOS","GM12878, Yale\n(optimal IDR-thresholded dataset)","All 2227 peaks (SP motif)",395]
[]
[null,null,"2184 peaks (NFY motif), after masking the SP motif",934]
[]
[null,"K562, Yale\n(optimal IDR-thresholded dataset)","All 7628 peaks (a mix of primary AP1 motif and NFY  motif)",104]
[]
[null,"K562, Yale\n(SPP dataset)","All 5781 peaks (SP motif)",1780]
[]
[null,null,"5601 peaks (a mix of primary AP1 and NFY motif), after masking SP motif",1610]
[]
["MYC","H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 4542 peaks (SP motif)",271]
[]
[null,"HeLa-S3, Yale\n(SPP dataset)","All 5414 peaks (SP motif)",656]
[]
[null,"HUVEC, UTA\n(optimal IDR-thresholded dataset)","All 5134 peaks (SP motif)",139]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 24096 peaks (SP motif)",2240]
[]
[null,"K562, Stanford\nTreatment: IFNg for 30 minutes\n(SPP dataset)","All 22384 peaks (SP motif)",2710]
[]
[null,"K562, Yale\n(optimal IDR-thresholded dataset)","All 5011 peaks (SP motif)",344]
[]
[null,"K562, Yale\nTreatment: IFNa for 30 minutes\n(optimal IDR-thresholded dataset)","All 7742 peaks (SP motif)",530]
[]
[null,"K562, Yale\nTreatment: IFNa for 6 hours\n(optimal IDR-thresholded dataset)","All 10570 peaks (SP motif)",801]
[]
[null,"K562, Yale\nTreatment: IFNg for 6 hours\n(optimal IDR-thresholded dataset)","All 19252 peaks (SP motif)",1420]
[]
[null,"K562, UTA\n(optimal IDR-thresholded dataset)","All 11688 peaks (SP motif)",942]
[]
[null,"HepG2, UTA\n(optimal IDR-thresholded dataset)","All 4403 peaks (SP motif)",315]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 1µM afimoxifene for 4 hours \n(optimal IDR-thresholded dataset)","All 25644 peaks (AP1 motif)",1160]
[]
[null,null,"25486 peaks (TEAD motif), after masking the AP1 motif",3000]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 0.01% ethanol for 36 hours \n(optimal IDR-thresholded dataset)","Top 25000 peaks (AP1 motif)",876]
[]
[null,"NB4, Stanford\n(optimal IDR-thresholded dataset)","All 26215 peaks (SP motif)",1520]
[]
["CREB1","A549, HAIB\nProtocol: v041610.2\nTreatment: 100nM dexamethasone for 1 hour\n(optimal IDR-thresholded dataset)","All 15886 peaks (SP motif)",2060]
[]
[null,"ECC-1, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 2902 peaks (SP motif)",489]
[]
[null,"ECC-1, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 10018 peaks (SP motif)",1000]
[]
[null,"K562, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 6816 peaks (SP motif)",1080]
[]
[null,"HepG2, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 9966 peaks (SP motif)",1790]
[]
[null,"HepG2, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 5299 peaks (SP motif)",648]
[]
["CREB3","K562, Stanford\nTarget: eGFP-CREB3\n(conservative IDR-thresholded dataset)","Top 2000 peaks (YY motif)","N/A"]
[]
[null,null,"Top 5000 peaks (YY motif)",0.25600000000000001]
[]
["CREM","GM12878, HAIB\n(optimal IDR-thresholded dataset)","All 23689 peaks (IRF motif)",592]
[]
[null,null,"Top 10000 peaks (SP motif)",734]
[]
["E2F1","HeLa-S3, USC\n(optimal IDR-thresholded dataset)","All 5041 peaks (SP motif)",901]
[]
[null,"HeLa-S3, USC\nTarget: HA-E2F1\n(optimal IDR-thresholded dataset)","All 10247 peaks (SP motif)",2630]
[]
["E2F4","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 3429 peaks (SP motif)",382]
[]
[null,"HeLa-S3, USC\n(optimal IDR-thresholded dataset)","All 2824 peaks (SP motif)",244]
[]
[null,"K562, USC\n(optimal IDR-thresholded dataset)","All 8170 peaks (SP motif)",1100]
[]
["E2F6","HeLa-S3, USC\n(SPP dataset)","All 3426 peaks (SP motif)",1070]
[]
[null,"K562, HAIB, Replicate 1\nProtocol: v041610.2\n(initial peak dataset)","All 14305 peaks (SP motif)",2540]
[]
[null,"K562, HAIB, Replicate 2\nProtocol: v041610.2\n(initial peak dataset)","All 41821 peaks (SP motif)",2930]
[]
[null,"K562, USC\n(initial peak dataset)","All 11853 peaks (SP motif)",1940]
[]
["EED","GM12878, HAIB\n(conservative IDR-thresholded dataset)","All 25862 peaks (IRF motif)",792]
[]
[null,null,"All 25694 peaks (RUNX motif)",3290]
[]
["ELF1","GM12878, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 22962 peaks (SP motif)",1620]
[]
[null,"MCF7, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 10176 peaks (SP motif)",1020]
[]
[null,"SK-N-SH, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 3558 peaks (SP motif)",438]
[]
["ELK1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 5577 peaks (SP motif)",761]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 4807 peaks (SP motif)",765]
[]
["ETS1","A549, HAIB\nProtocol: v042211.1\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","All 5514 peaks (SP motif)",515]
[]
[null,null,"Top 5000 peaks (ZNF143 motif)",6.67]
[]
[null,"GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 4107 peaks (SP motif)",309]
[]
[null,null,"Top 500 peaks (ZBTB33 motif)",12.6]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","Top 2500 peaks (ZNF143 motif)",2.46]
[]
["ETV6","GM12878, HAIB\n(conservative IDR-thresholded dataset)","All 10802 peaks (IRF motif)",800]
[]
["EZH2","Astrocyte, Broad\n(optimal IDR-thresholded dataset)","All 6484 peaks (SP motif)",762]
[]
[null,"Fibroblast of dermis, Broad\n(optimal IDR-thresholded dataset)","All 5730 peaks (SP motif)",1330]
[]
[null,"GM12878, Broad\n(optimal IDR-thresholded dataset)","All 2467 peaks (IRF motif)",325]
[]
[null,"T-cell acute lymphoblastic leukemia,  Broad\n(optimal IDR-thresholded dataset)","All 1721 peaks (SP motif)",105]
[]
["FOSL1","H1-hESC, HAIB, Replicate 1\nProtocol: v041610.2\n(initial peak dataset)","All 1394 peaks (SP motif)",47.2]
[]
["FOXM1","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 22846 peaks (IRF motif)",1360]
[]
[null,null,"Top 500 peaks (IRF motif)","N/A"]
[]
["FOXP2","PFSK-1, HAIB\nProtocol: PCR2x\n(optimal IDR-thresholded dataset)","All 18140 peaks (SP motif)",1730]
[]
[null,null,"Top 500 peaks (SP motif)","N/A"]
[]
[null,"SK-N-MC, HAIB\nProtocol: PCR2x\n(optimal IDR-thresholded dataset)","All 14659 peaks (IRF motif)",389]
[]
["GABPA","A549, HAIB\nProtocol: v042211.1\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","All 12314 peaks (SP motif)",619]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 14322 peaks (SP motif)",1060]
[]
[null,"HepG2, HAIB\nProtocol: PCR2x\n(optimal IDR-thresholded dataset)","Top 8000 peaks (SP motif)",1290]
[]
[null,"MCF7, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 9548 peaks (SP motif)",1310]
[]
[null,"SK-N-SH, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 4319 peaks (SP motif)",527]
[]
[null,"SK-N-SH, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 6682 peaks (SP motif)",1010]
[]
["GATA2","HUVEC, USC\n(SPP dataset)","All 24222 peaks (TEAD motif)",3190]
[]
[null,null,"24178 peaks (AP1 motif), after masking the TEAD motif ",971]
[]
["GATA3","T47D, USC\nProtocol: v041610.2\nTreatment: 0.02% dimethyl sulfoxide for 1 hour\n(optimal IDR-thresholded dataset)","Top 5000 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 15000 peaks (FOXA motif)",2150]
[]
["GATA4","HepG2, HAIB\n(optimal IDR-thresholded dataset)","All 10219 peaks (SP motif)",870]
[]
[null,null,"Top 500 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 2000 peaks (FOXA motif)",186]
[]
["GTF2B","K562, HMS\n(optimal IDR-thresholded dataset)","All 2918 peaks (SP motif)",276]
[]
["HDAC1","K562, Stanford\n(optimal IDR-thresholded dataset)","All 11780 peaks (SP motif)",1830]
[]
["HDAC2","HepG2, HA\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","Top 5000 peaks (FOXA motif)",352]
[]
["HMGN3","K562, HMS\n(optimal IDR-thresholded dataset)","All 14436 peaks (SP motif)",3490]
[]
["HSF1","HepG2, Stanford\nTreatment: forskolin for 6 hours\n(optimal IDR-thresholded dataset)","Top 500 peaks (B-Box motif)",147]
[]
["ID3","K562, Stanford\nTarget: eGFP-ID3\n(conservative IDR-thresholded dataset)","Top 500 peaks (YY motif)","N/A"]
[]
[null,null,"Top 2500 peaks (YY motif)",39.299999999999997]
[]
["IKZF1","GM12878, USC\n(optimal IDR-thresholded dataset)","All 9045 peaks (IRF motif)",153]
[]
[null,null,"Top 500 peaks (IRF motif)","N/A"]
[]
["ILK","K562, Stanford\nTarget: eGFP-ILK\n(optimal IDR-thresholded dataset)","All 1601 peaks (YY motif)",102]
[]
["IRF1","K562, Stanford\nTreatment: IFNg for 6 hours\n(optimal IDR-thresholded dataset)","All 12499 peaks (SP motif)",2400]
[]
["IRF3","HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 1575 peaks (SP motif)",200]
[]
[null,null,"1569 peaks (NFY motif), after masking the SP motif",698]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 684 peaks (NFY motif)",1.52]
[]
["IRF4","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 17404 peaks (RUNX motif)",3100]
[]
["IRF9","K562, Stanford\n(optimal IDR-thresholded dataset)","Top 500 peaks (YY motif)","N/A"]
[]
[null,null,"Top 3000 peaks (YY motif)",79.099999999999994]
[]
["JUND","A549, HAIB, Replicate 2\nProtocol: v041610.2\nTreatment: 0.02% ethanol for 1 hour\n(initial peak dataset)","All 24252 peaks (SP motif)",1730]
[]
[null,"H1-hESC, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 8418 peaks (SP motif)",1200]
[]
[null,"K562, Yale\n(SPP dataset)","All 759 peaks (SP motif)",218]
[]
["KAT2A","HeLa-S3, Stanford\n(initial peak dataset)","All 1170 peaks (SP motif)",80.8]
[]
["KDM5A","H1-hESC, Broad\n(optimal IDR-thresholded dataset)","Top 500 peaks (YY motif)",58.4]
[]
[null,null,"1612 peaks (NFKB motif), after masking noise",318]
[]
["KDM5B","K562, Broad\n(optimal IDR-thresholded dataset)","All 15442 peaks (SP motif)",2460]
[]
["KLF13","K562, Stanford\nTarget: eGFP-KLF13\n(optimal IDR-thresholded dataset)","All 8833 peaks (SP motif)",884]
[]
["MAX","A549, Stanford\n(optimal IDR-thresholded dataset)","All 9853 peaks (SP motif)",1080]
[]
[null,"GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 12533 peaks (SP motif)",1470]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 29561 peaks (SP motif)",2430]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 11809 peaks (SP motif)",1160]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 31357 peaks (SP motif)",2550]
[]
[null,"MCF-7, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 12393 peaks (SP motif)",1430]
[]
[null,"NB4, Stanford\n(optimal IDR-thresholded dataset)","All 34553 peaks (ETS motif)",909]
[]
[null,null,"Top 25000 peaks (SP motif)",2010]
[]
["MBD4","HepG2, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 500 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 1000 peaks (FOXA motif)",189]
[]
["MEF2A","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 17536 peaks (IRF motif)",344]
[]
[null,null,"17184 peaks (RUNX motif), after masking the IRF motif",1760]
[]
["MEF2C","GM12878, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 9815 peaks (IRF motif)",46.4]
[]
[null,null,"9035 peaks (RUNX motif), after masking the IRF motif",868]
[]
["MTA3","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 12009 peaks (IRF motif)",1360]
[]
["MXI1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 17709 peaks (SP motif)",1730]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 6345 peaks (SP motif)",525]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 11979 peaks (SP motif)",1400]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 20325 peaks (SP motif)",2150]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 6695 peaks (SP motif)",938]
[]
["NANOG","H1-hESC, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 5462 peaks (SOX2 motif)",14.9]
[]
[null,null,"Top 2500 peaks (SOX2 motif)","N/A"]
[]
["NFE2","GM12878, Stanford\n(initial peak dataset)","All 10855 peaks (IRF motif)",1160]
[]
[null,null,"6492 peaks (USF motif), after masking the IRF motif",609]
[]
[null,"GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 761 peaks (USF motif)",180]
[]
[null,null,"766 peaks (SP motif), after masking the USF motif",29.6]
[]
["RELA/NFKB","GM10847, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 9254 peaks (IRF motif)",129]
[]
[null,"GM12878, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 16962 peaks (IRF motif)",1020]
[]
[null,"GM12891, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 28652 peaks (IRF motif)",2530]
[]
[null,"GM15510, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 12795 peaks (SP motif)",754]
[]
[null,"GM18505, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 8800 peaks (IRF motif)",131]
[]
[null,"GM18951, Stanford\nTreatment: 25ng/mL TNFa for 6 hours\n(optimal IDR-thresholded dataset)","All 13515 peaks (IRF motif)",266]
[]
["NFYA","HeLa-S3, HMS\n(optimal IDR-thresholded dataset)","All 5950 peaks (SP motif)",735]
[]
["NRF1","SK-N-SH, Stanford\n(initial peak dataset)","All 6002 peaks (SP motif)",388]
[]
["NRSF/REST","HepG2, HAIB, Replicate 2\nProtocol: v041610.1\n(initial peak dataset)","All 17471 peaks (SP motif)",2820]
[]
["NFIC","HepG2, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 2000 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 9000 peaks (FOXA motif)",1100]
[]
["NR2F2","K562, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 6000 peaks (GATA1-TAL1 motif)","N/A"]
[]
[null,null,"Top 7000 peaks (GATA1-TAL1 motif)",14.5]
[]
["P300/EP300","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 5154 peaks (IRF motif)",0.73]
[]
[null,null,"5062 peaks (RUNX motif), after masking the IRF motif",143]
[]
[null,"GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 17442 peaks (IRF motif)",265]
[]
[null,null,"17400 peaks (RUNX motif), after masking the IRF motif",1680]
[]
[null,"GM12878, Stanford, 2\n(optimal IDR-thresholded dataset)","All 6186 peaks (IRF motif)",223]
[]
[null,null,"6154 peaks (RUNX motif), after masking the IRF motif",253]
[]
[null,"H1-hESC, HAIB, Replicate 1\nProtocol: v041610.2\n(initial peak dataset)","All 2722 peaks (SP motif)",871]
[]
[null,"H1-hESC, HAIB, Replicate 2\nProtocol: v041610.2\n(initial peak dataset)","All 11069 peaks (SP motif)",1440]
[]
[null,"H1-hESC, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 8890 peaks (SP motif)",1210]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 25804 peaks (AP1 motif)",791]
[]
[null,null,"Top 3000 peaks (CEBPB motif)",592]
[]
[null,"HepG2, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 22375 peaks (FOXA motif)",3260]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","Top 10000 peaks (GATA1-TAL1 motif)",2.13]
[]
[null,"T47D, HAIB\nProtocol: v041610.2\nTreatment: 0.02% dimethyl sulfoxide for 1 hour\n(optimal IDR-thresholded dataset)","Top 8000 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 8500 peaks (FOXA motif)",528]
[]
["PAX5","GM12878, HA\nTarget: PAX5-C20,\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 25197 peaks (SP motif)",295]
[]
[null,"GM12892, HA\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 10088 peaks (SP motif)",1210]
[]
["PBX3","A549, HAIB, Replicate 1\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 5628 peaks (SP motif)",931]
[]
[null,"A549, HAIB, Replicate 2\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 6052 peaks (SP motif)",1210]
[]
["PGC1A","HepG2, Stanford\nTreatment: forskolin\n(SPP dataset)","All 429 peaks (HSF motif)",311]
[]
["PHF8","K562, Broad\n(optimal IDR-thresholded dataset)","All 22082 peaks (SP motif)",8560]
[]
["PML","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 16642 peaks (SP motif)",1080]
[]
[null,"K562, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 3500 peaks (GATA1-TAL1 motif)",7.46]
[]
[null,"MCF-7, HAIB, Replicate 1\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 4788 peaks (SP motif)",473]
[]
["POLR2A","ECC-1, HAIB, Replicate 1\nProtocol: v041610.2\nTreatment: 0.02% dimethyl sulfoxide for 1 hour\n(initial peak dataset)","All 20591 peaks (SP motif)",2710]
[]
[null,"ECC-1, HAIB, Replicate 2\nProtocol: v041610.2\nTreatment: 0.02% dimethyl sulfoxide for 1 hour\n(initial peak dataset)","All 35893 peaks (SP motif)",3670]
[]
[null,"HepG2, Stanford\nTarget: POLR2AphosphoS2\n(optimal IDR-thresholded dataset)","All 4073 peaks (SP motif)",129]
[]
["POLR3A\n/RPC155","HeLa-S3, HMS\n(SPP dataset)","2282 peaks (A-Box motif), , after using masking",202]
[]
[null,"K562, HMS\n(optimal IDR-thresholded dataset)","1285 peaks (B-Box motif), after using masking",116]
[]
[null,"K562, HMS\n(SPP dataset)","All 903 peaks (B-Box motif)",139]
[]
[null,null,"913 peaks (A-Box motif), after masking the B-Box motif",151]
[]
["POLR3G\n/RPC32","GM12878, Yale\n(optimal IDR-thresholded dataset)","All 210 peaks (B-Box motif)",22.1]
[]
[null,null,"210 peaks (A-Box motif), after masking the B-Box motif",20.6]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 207 peaks (B-Box motif)",31.1]
[]
[null,null,"206 peaks (A-Box motif), after masking the B-Box motif",7.04]
[]
["POU2F2","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 22777 peaks (IRF motif)",413]
[]
[null,"GM12891, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 14583 peaks (SP motif)",431]
[]
["PTRF","K562, HAIB\nTarget: eGFP-PTRF\n(optimal IDR-thresholded dataset)","All 3793 peaks (YY motif)",93.1]
[]
["PTTG1","K562, Stanford\nTarget: eGFP-PTRF\n(optimal IDR-thresholded dataset)","All 4099 peaks (YY motif)",69.3]
[]
["PYGO2","K562, Stanford\n(optimal IDR-thresholded dataset)","Top 1000 peaks (YY motif)","N/A"]
[]
[null,null,"All 4577 peaks (YY motif)",421]
[]
["RAD21","GM12878, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 35572 peaks (CTCF motif)",6110]
[]
[null,"GM12878, Stanford\n(SPP dataset)","All 27134 peaks (CTCF motif)",4680]
[]
[null,"H1-hESC, Stanford\n(SPP dataset)","All 48575 peaks (CTCF motif)",7690]
[]
[null,"HeLa-S3, Stanford\n(SPP dataset)","All 35240 peaks (CTCF motif)",6260]
[]
["RBBP5","K562, Broad\n(optimal IDR-thresholded dataset)","All 14116 peaks (SP motif)",5600]
[]
[null,"H1-hESC, Broad\n(optimal IDR-thresholded dataset)","All 16144 peaks (SP motif)",1930]
[]
["RCOR1","HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 5315 peaks (SP motif)",1250]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","Top 500 peaks (GATA1-TAL1 motif)","N/A"]
[]
[null,null,"Top 700 peaks (GATA1-TAL1 motif)",0.28000000000000003]
[]
[null,"K562, Stanford, 2\n(optimal IDR-thresholded dataset)","Top 2000 peaks (GATA1-TAL1 motif)","N/A"]
[]
[null,null,"Top 5000 peaks (GATA1-TAL1 motif)","N/A"]
[]
[null,null,"Top 6000 peaks (GATA1-TAL1 motif)",9.5699999999999993E-2]
[]
["RUNX1","K562, HAIB\n(optimal IDR-thresholded dataset)","Top 500 peaks (GATA motif)",1140]
[]
["RUNX3","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 67670 peaks (IRF motif)",156]
[]
["RFX5","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 4328 peaks (SP motif)",310]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 5994 peaks (SP motif)",667]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 2194 peaks (SP motif)",3.71]
[]
["SAP30","K562, Broad\n(optimal IDR-thresholded dataset)","All 9720 peaks (SP motif)",2660]
[]
["SIN3A","A549, HAIB\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","All 6004 peaks (SP motif)",372]
[]
[null,"GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 10342 peaks (SP motif)",1510]
[]
[null,"H1-hESC, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 8943 peaks (SP motif)",1580]
[]
[null,null,"Top 1000 peaks (NRSF motif)","N/A"]
[]
[null,null,"Top 3000 peaks (NRSF motif)",70.3]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 21250 peaks (SP motif)",3310]
[]
[null,null,"Top 500 peaks (NRSF motif)","N/A"]
[]
[null,null,"Top 1000 peaks (NRSF motif)","N/A"]
[]
[null,null,"Top 2000 peaks (NRSF motif)",33.1]
[]
[null,"HepG2, HAIB\nProtocol: PCR1x\n(SPP dataset)","All 10391 peaks (SP motif)",1290]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 8063 peaks (SP motif)",1740]
[]
[null,"PANC1, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 7100 peaks (SP motif)",1950]
[]
["SIRT6","K562, HMS\n(optimal IDR-thresholded dataset)","All 2301 peaks (GATA motif)",341]
[]
["SIX5","GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 4788 peaks (ZNF143 motif)",102]
[]
[null,"H1-hESC, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 3328 peaks (ZNF143 motif)",85.5]
[]
[null,"K562, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 4155 peaks (ZNF143 motif)",81.599999999999994]
[]
[null,"K562, HAIB, Replicate 2\nProtocol: v041610.1\n(initial peak dataset)","All 4148 peaks (ZNF143 motif)",62.2]
[]
["SMAD5","GM12878, HAIB\n(optimal IDR-thresholded dataset)","All 7953 peaks (SP motif)",790]
[]
[null,"K562, HAIB\n(conservative IDR-thresholded dataset)","All 12533 peaks (SP motif)",1980]
[]
["SMARCB1/\nINI1","HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 7772 peaks (SP motif)",1730]
[]
["SMC3","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 30402 peaks (CTCF motif)",5300]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","All 39472 peaks (CTCF motif)",7100]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 30687 peaks (CTCF motif)",5420]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 23577 peaks (CTCF motif)",4170]
[]
["SP1","HepG2, HAIB\nProtocol: PCR1x\n(SPP dataset)","Top 14500 peaks (HNF4 motif)",570]
[]
["SP2","HepG2, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 2621 peaks (NRSF motif)",95.3]
[]
["SREBF1","HepG2, Stanford\nTreatment: insulin for 6 hours\n(optimal IDR-thresholded dataset)","All 2583 peaks (SP motif)",500]
[]
["SREBF2","HepG2, Yale\nTreatment: 2µM pravastatin for 16 hours\n(initial peak dataset)","All 103 peaks (SP motif)",4.8499999999999996]
[]
["SRF","ECC-1, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 3841 peaks (SP motif)",322]
[]
[null,"GM12878, HAIB\nProtocol: PCR2x\n(optimal IDR-thresholded dataset)","All 8478 peaks (SP motif)",260]
[]
[null,"GM12878, HAIB\nProtocol: PCR2x\n(SPP dataset)","All 2404 peaks (ETS motif)",575]
[]
[null,"GM12878, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 9071 peaks (ETS motif)",1580]
[]
[null,"HCT116, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","All 2309 peaks (AP1 motif), after masking noise",143]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 4700 peaks (SP motif)",125]
[]
[null,"MCF-7, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","All 6148 peaks (SP motif)",189]
[]
["STAT1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 1769 peaks (SP motif)",188]
[]
[null,"K562, Yale\nTreatment: IFNa for 30 minutes\n(optimal IDR-thresholded dataset)","All 1502 peaks (IRF motif)",6.77]
[]
[null,"K562, Yale\nTreatment: IFNa for 6 hours\n(optimal IDR-thresholded dataset)","All 1474 peaks (IRF motif)",115]
[]
["STAT2","K562, Yale\nTreatment: IFNa for 30 minutes\n(SPP dataset)","Top 1000 peaks (IRF motif)",376]
[]
[null,"K562, Yale\nTreatment: IFNa for 6 hours\n(optimal IDR-thresholded dataset)","All 1922 peaks (IRF motif)",220]
[]
["STAT3","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 6483 peaks (IRF motif)",875]
[]
[null,"HeLa-S3, Stanford\n(SPP dataset)","All 10109 peaks (AP1 motif)",578]
[]
[null,null,"10082 peaks (TEAD motif), after masking the AP1 motif",1150]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 0.01% ethanol for 4 hours \n(optimal IDR-thresholded dataset)","All 44934 peaks (AP1 motif)",1550]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 0.01% ethanol for 12 hours \n(optimal IDR-thresholded dataset)","All 41169 peaks (AP1 motif)",1790]
[]
[null,null,"40971 peaks (TEAD motif), after masking the AP1 motif",4280]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 1µM afimoxifene for 12 hours \n(optimal IDR-thresholded dataset)","All 39680 peaks (AP1 motif)",1620]
[]
[null,null,"39282 peaks (TEAD motif), after masking the AP1 motif",6490]
[]
[null,"MCF10A-Er-Src, HMS\nTreatment: 1µM afimoxifene for 36 hours \n(optimal IDR-thresholded dataset)","All 44330 peaks (AP1 motif)",1490]
[]
[null,null,"44047 peaks (TEAD motif), after masking the AP1 motif",5660]
[]
["STAT5A","GM12878, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","All 7401 peaks (IRF motif)",456]
[]
[null,"K562, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 6500 peaks (GATA1-TAL1 motif)",0.91]
[]
["SUZ12","NT2-D1, USC\n(optimal IDR-thresholded dataset)","All 3302 peaks (SP motif)",544]
[]
["TAF1","A549, HAIB\nProtocol: v042211.1\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","All 9936 peaks (SP motif)",1290]
[]
[null,"GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 14235 peaks (SP motif)",1290]
[]
[null,"H1-hESC, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 20516 peaks (SP motif)",2600]
[]
[null,"HeLa-S3, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 16057 peaks (SP motif)",1760]
[]
[null,"HepG2, HAIB\nProtocol: PCR2x\n(SPP dataset)","All 15134 peaks (SP motif)",3900]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 15684 peaks (SP motif)",2050]
[]
[null,"PFSK-1, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 5826 peaks (SP motif)",1800]
[]
[null,"SK-N-SH, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 13937 peaks (SP motif)",1650]
[]
["TAF7","H1-hESC, HAIB, Replicate 1\nProtocol: v041610.2\n(initial peak dataset)","All 4552 peaks (SP motif)",1460]
[]
[null,"K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 3413 peaks (SP motif)",107]
[]
[null,"K562, Stanford\nTarget: eGFP-TAF7\n(optimal IDR-thresholded dataset)","Top 1500 peaks (YY motif)",61.2]
[]
["TBL1XR1","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 13672 peaks (IRF motif)",1630]
[]
[null,null,"Top 500 peaks (IRF motif)","N/A"]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","Top 1500 peaks (GATA1-TAL1 motif)",1.06]
[]
["TBP","GM12878, Stanford\n(optimal IDR-thresholded dataset)","Top 200 peaks (B-Box motif)",2200]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 17146 peaks (SP motif)",1770]
[]
[null,null,"Top 200 peaks (B-Box motif)",770]
[]
[null,"HeLa-S3, Stanford\n(optimal IDR-thresholded dataset)","Top 200 peaks (B-Box motif)",415]
[]
[null,"HepG2, Stanford\n(optimal IDR-thresholded dataset)","All 13753 peaks (SP motif)",1340]
[]
[null,null,"Top 200 peaks (B-Box motif)",567]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 17513 peaks (SP motif)",1750]
[]
[null,null,"Top 200 peaks (B-Box motif)",394]
[]
["TCF12","HepG2, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 2058 peaks (FOXA motif)",87.3]
[]
[null,"MCF7, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","Top 200 peaks (B-Box motif)",481]
[]
["TCF7","GM12878, HAIB\n(optimal IDR-thresholded dataset)","All 7208 peaks (IRF motif)",210]
[]
[null,"K562, HAIB\n(optimal IDR-thresholded dataset)","All 3491 peaks (SP motif)",61.9]
[]
["TCF7L2","HCT116, USC\n(optimal IDR-thresholded dataset)","Top 10000 peaks (SP motif)",1100]
[]
["TEAD2","K562, Stanford\nTarget: eGFP-TEAD2\n(optimal IDR-thresholded dataset)","All 4834 peaks (YY motif)",122]
[]
["TEAD4","A549, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","Top 6000 peaks (NRSF motif)",1230]
[]
[null,"A549, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","5659 peaks (AP1 motif), after masking noise",471]
[]
[null,"HCT116, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","2630 peaks (AP1 motif), after masking noise",443]
[]
[null,"HCT116, HAIB, Replicate 2\nProtocol: v042211.1\n(initial peak dataset)","2193 peaks (AP1 motif), after masking noise",260]
[]
[null,"HepG2, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 8500 peaks (FOXA motif)","N/A"]
[]
[null,null,"Top 9000 peaks (FOXA motif)",1350]
[]
[null,"K562, HAIB\nProtocol: v042211.1\n(optimal IDR-thresholded dataset)","Top 17000 peaks (GATA1-TAL1 motif)","N/A"]
[]
[null,null,"Top 18500 peaks (GATA1-TAL1 motif)",1100]
[]
[null,"SK-N-SH, HAIB, Replicate 1\nProtocol: v042211.1\n(initial peak dataset)","11186 peaks (AP1 motif), after masking noise",1000]
[]
["THAP1","K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 3476 peaks (SP motif)",314]
[]
["TR4/NR2C2","GM12878, USC\n(optimal IDR-thresholded dataset)","Top 200 peaks (SP motif)",613]
[]
[null,"HeLa-S3, USC\n(optimal IDR-thresholded dataset)","All 2112 peaks (SP motif)",18.5]
[]
[null,null,"Top 1500 peaks (ETS motif)",95.6]
[]
[null,"HepG2, USC\n(optimal IDR-thresholded dataset)","All 2943 peaks (SP motif)",136]
[]
[null,null,"Top 500 peaks (ETS motif)",44.6]
[]
[null,"K562, USC\n(optimal IDR-thresholded dataset)","All 581 peaks (SP motif)",142]
[]
["UBTF","K562, Stanford\n(optimal IDR-thresholded dataset)","All 5939 peaks (SP motif)",2220]
[]
["YY1","A549, HAIB, Replicate 1\nTreatment: 0.02% ethanol for 1 hour\n(initial peak dataset)","All 19859 peaks (SP motif)",842]
[]
[null,"HepG2, HAIB, Replicate 2\nProtocol: v041610.1\n(initial peak dataset)","All 8763 peaks (SP motif)",1260]
[]
[null,"K562, HAIB\nProtocol: v041610.2\n(optimal IDR-thresholded dataset)","All 23975 peaks (SP motif)",1270]
[]
["ZBED1","GM12878, HAIB\n(conservative IDR-thresholded dataset)","All 5824 peaks (IRF motif)",216]
[]
[null,"K562, HAIB\n(conservative IDR-thresholded dataset)","All 2970 peaks (SP motif)",343]
[]
["ZBTB33","A549, HAIB\nProtocol: v042211.1\nTreatment: 0.02% ethanol for 1 hour\n(optimal IDR-thresholded dataset)","Top 1500 peaks (SP motif)",343]
[]
[null,"GM12878, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 2139 peaks (SP motif)",68.2]
[]
[null,"HCT116, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","All 4307 peaks (SP motif)",292]
[]
[null,"HepG2, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 2869 peaks (SP motif)",216]
[]
[null,"HepG2, HAIB\nProtocol: v041610.1\n(SPP dataset)","All 1686 peaks (SP motif)",55.5]
[]
[null,"K562, HAIB\nProtocol: PCR1x\n(optimal IDR-thresholded dataset)","All 3274 peaks (SP motif)",50.4]
[]
["ZBTB7A","K562, HAIB\nProtocol: v041610.1\n(optimal IDR-thresholded dataset)","Top 500 peaks (SP motif)",1920]
[]
["ZHX2","HepG2, HAIB\n(optimal IDR-thresholded dataset)","All 7536 peaks (SP motif)",634]
[]
["ZNF143","GM12878, Stanford\n(optimal IDR-thresholded dataset)","All 19902 peaks (CTCF motif)",3130]
[]
[null,"H1-hESC, Stanford\n(optimal IDR-thresholded dataset)","All 30588 peaks (CTCF motif)",3710]
[]
[null,"K562, Stanford\n(optimal IDR-thresholded dataset)","All 29030 peaks (CTCF motif)",3760]